species:   Artha
pid:       MI0019202
parent:    ath-MIR5631
paralog:   
locus:     5:7122566-7122688
matures:   ['UGGCAGGAAAGACAUAAUUUU', 'AAUUAUGUCCUUCCUGCCAUA']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 5:7122566-7122688

0 out of bounds
2 alignments
2 proper strand
2 stranded perfect matches

***********************                                                                             ***********************
AAAAUUAUGUCCUUCCUGCCAUAUUAUAUUUAGGAAAAAAUAAUAUCGUAUUAUACAUAUAAACAGAAGCCUCUUAAAUAAUUUUUUCCUAAAUAUAUAAUAUGGCAGGAAAGACAUAAUUUU
(((((((((((.(((((((((((((((((((((((((((((.((((.(((...)))))))....(((....)))......))))))))))))..))))))))))))))))).)))))))))))
------------------------------------------------------------------------------------------------------UGGCAGGAAAGACAUAAUUUU l=21 a=0 c
--AAUUAUGUCCUUCCUGCCAUA---------------------------------------------------------------------------------------------------- l=21 a=2 c*
--AAUUAUGUCCUUCCUGCCAUA---------------------------------------------------------------------------------------------------- l=21 a=2 ma
------------------------------------------------------------------------------------------------------UGGCAGGAAAGACAUAAUUUU l=21 a=0 ma*

--AAUUAUGUCCUUCCUGCCAUA---------------------------------------------------------------------------------------------------- l=21 a=2 (c*,ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
